BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB031A11SP1|AL429326
(998 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1359 1181 0.0
3x_Contig1549 727 0.0
>3x_Contig1359
Length = 7536
Score = 1181 bits (591), Expect = 0.0
Identities = 598/603 (99%)
Strand = Plus / Plus
Query: 396 cttagataagctgataatgtgattgtgtcagaataaaaatagaactagagaaaaagaaaa 455
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 cttagataagatgataatgtgattgtgtcagaataaaaatagaactagagaaaaagaaaa 61
Query: 456 ggaaaaacgtgcgcgacgaggctcgagagaagcgtcagattaaattgttaacgacagaat 515
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 ggaaaaacgtgcgcgacgaggctcgagagaagcgtcagattaaattgttaacgacagaat 121
Query: 516 gcaggattataaaavamacataaagggtttagtggacatactagatctgttgtctcttag 575
|||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 gcaggattataaaaaaaacataaagggtttagtggacatactagatctgttgtctcttag 181
Query: 576 cttcttggcatttagtcctttttgaaagagcacattttaagacacacaagavacggatat 635
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 182 cttcttggcatttagtcctttttgaaagagcacattttaagacacacaagaaacggatat 241
Query: 636 ctgtgaataacgtagtttctgccaagtaggaacgatgtggaaattgacattgttcttggc 695
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 ctgtgaataacgtagtttctgccaagtaggaacgatgtggaaattgacattgttcttggc 301
Query: 696 gatatgggtaccgataagcttctgttttgtgattttagaggacgagtttttatatcttca 755
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 gatatgggtaccgataagcttctgttttgtgattttagaggacgagtttttatatcttca 361
Query: 756 taaaaatggtatttgcaataagccacaatttcactatgaagcagataattcagaggaaga 815
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 taaaaatggtatttgcaataagccacaatttcactatgaagcagataattcagaggaaga 421
Query: 816 gttcgcggtgttttacaacaactgggatggattgcagttaccagaaacgagattcggaga 875
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 gttcgcggtgttttacaacaactgggatggattgcagttaccagaaacgagattcggaga 481
Query: 876 ccagttcaccagtaaatatagttttttgaaatgggttgacgtattctatggtaccctggg 935
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 ccagttcaccagtaaatatagttttttgaaatgggttgacgtattctatggtaccctggg 541
Query: 936 tgggcatatgttctccgggactgctgttccctttggtatgtgtaagatgggtgtagatgt 995
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 tgggcatatgttctccgggactgctgttccctttggtatgtgtaagatgggtgtagatgt 601
Query: 996 rat 998
||
Sbjct: 602 gat 604
>3x_Contig1549
Length = 13677
Score = 727 bits (364), Expect = 0.0
Identities = 391/403 (97%), Gaps = 2/403 (0%)
Strand = Plus / Minus
Query: 1 gatcttctttatctgbcatcttttctggtttgcctatcttgttgacttcgttctattatt 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 gatcttctttatctggcatcttttctggtttgcctatcttgttgacttcgttctattatt 342
Query: 61 tttaaattggggacatatcttcaaatttaccagggaggkaattcgattcatacttcgatc 120
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 341 tttaaattggggacatatcttcaaatttaccagggaggtaattcgattcatacttcgatc 282
Query: 121 cgatgagcgytcttyyanccttctcgatccgtccaaagattcattccgattcctaaacca 180
||||||| | |||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 cgatgag-gttcttttatacttctcgatccgtccaaagattcattccgattcctaaacca 223
Query: 181 ctaaaggtaactacaagaactgaaagaattgaaaaaragtcttgccaacagaaacaggca 240
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 222 ctaaaggtaactacaagaactgaaagaattgaaaaaaagtcttgccaacagaaacaggca 163
Query: 241 agtgcaagagaaaaggaccatctggcccatctggcaccttttttccattcatttcacctc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 162 agtgcaagagaaaaggaccatctggcccatctggcaccttttttccattcatttcacctc 103
Query: 301 atttcatgcaatatgcatgtatgtrgctcaatgcaagakgcggttacgttgatctggcta 360
|||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| ||
Sbjct: 102 atttcatgcaatatgcatgtatgtagctcaatgcaagatgcggttacgttgatctgg-ta 44
Query: 361 aagcaggtaacgtgactagcaaagggtcctactatcttagata 403
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43 aagcaggtaacgtgactagcaaagggtcctactatcttagata 1
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.32
Gapped
Lambda K H
1.38 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7267
Number of Sequences: 1807
Number of extensions: 7267
Number of successful extensions: 57
Number of sequences better than 1.0e-20: 2
length of query: 998
length of database: 10,358,551
effective HSP length: 16
effective length of query: 982
effective length of database: 10,329,639
effective search space: 10143705498
effective search space used: 10143705498
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.4 bits)